Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_2360Glycerol3phosphate transportrelated protein GlpU. (103 aa)    
Predicted Functional Partners:
BF49_2361
Glycerol3phosphate ABC transporter permease protein UgpE TC 3A113.
 
    0.954
BF49_2362
Glycerol3phosphate ABC transporter permease protein UgpA TC 3A113.
 
    0.953
BF49_2363
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
 
    0.953
BF49_2364
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
 
    0.951
BF49_2359
Glycerol3phosphate ABC transporter permease protein UgpA TC 3A113.
 
     0.934
BF49_2365
Aerobic glycerol3phosphate dehydrogenase EC 1153; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
     0.825
BF49_2368
Glycerol3phosphate regulon repressor DeoR family.
 
     0.700
BF49_2366
VapB protein antitoxin to VapC; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.446
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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