STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-2VapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)    
Predicted Functional Partners:
BF49_2366
VapB protein antitoxin to VapC; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.962
BF49_0080
Phosphopantothenoylcysteine decarboxylase EC 41136 Phosphopantothenoylcysteine synthetase EC 6325; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
   
 
 0.776
BF49_6166
Prevent host death protein Phd antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.685
BF49_6398
Transcriptional regulator XRE family.
 
     0.494
BF49_2749
Hypothetical protein.
 
   
 0.476
BF49_6612
FIG045511 hypothetical antitoxin to FIG022160 hypothetical toxin.
 
     0.434
BF49_0587
Programmed cell death antitoxin MazE like.
 
   
 0.420
vapC-3
UPF0110 protein Mb0640; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
  
 0.415
BF49_2364
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
       0.411
BF49_2365
Aerobic glycerol3phosphate dehydrogenase EC 1153; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.411
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.