Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2392FIG00440518 hypothetical protein. (170 aa)    
Predicted Functional Partners:
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
     
  0.658
BF49_2393
FIG00441768 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
       0.542
BF49_2391
Glyoxalase family protein.
  
    0.531
glmM
Phosphoglucosamine mutase EC 54210; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
  0.500
BF49_6372
FIG00852517 hypothetical protein.
  
     0.495
BF49_3501
Phosphoglucosamine mutase EC 54210 Phosphomannomutase EC 5428.
     
  0.471
kynU
Kynureninase EC 3713; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
    
  0.439
BF49_3138
Bll7611 hypothetical protein.
 
  
  0.434
BF49_4098
Bll7611 hypothetical protein.
 
  
  0.434
BF49_2390
3demethylubiquinone9 3methyltransferase.
       0.418
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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