STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2408Protein involved in metapathway of phenol degradation. (266 aa)    
Predicted Functional Partners:
BF49_4150
TRAP dicarboxylate transporter DctQ subunit unknown substrate 3.
  
     0.686
BF49_1694
Predicted exporter of the RND superfamily Rpal 4267.
  
     0.610
BF49_0916
DoxX.
  
     0.601
BF49_1638
Bll3052 protein.
  
    0.545
BF49_3071
FIG00441001 hypothetical protein.
  
     0.545
BF49_2409
Putative exported protein.
 
     0.543
BF49_5005
FIG00442082 hypothetical protein.
  
     0.503
BF49_2516
Hypothetical protein.
  
     0.502
BF49_2972
FIG00439885 hypothetical protein.
  
     0.490
BF49_3938
FIG01005113 hypothetical protein.
 
     0.485
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.