STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2411Mobile element protein. (445 aa)    
Predicted Functional Partners:
BF49_2423
Transposase.
  
     0.757
BF49_2413
Transcriptional regulator GntR family.
 
     0.521
BF49_2414
GbcA Glycine betaine demethylase subunit A.
 
     0.519
BF49_2981
FIG00441988 hypothetical protein.
  
     0.508
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
       0.456
BF49_6312
FIG00446684 hypothetical protein.
  
     0.431
BF49_5646
Hypothetical protein.
  
     0.425
BF49_0994
FIG00440764 hypothetical protein.
  
     0.414
BF49_0386
Cytochrome ctype biogenesis protein CcmGDsbE thioldisulfide oxidoreductase.
  
     0.403
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.