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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
gmdGDPmannose 46dehydratase EC 42147; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (356 aa)    
Predicted Functional Partners:
fcl
GDPLfucose synthetase EC 111271; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.998
fcl-2
GDPLfucose synthetase EC 111271; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.992
BF49_2432
Mannose1phosphate guanylyltransferase GDP EC 27722 Mannose6phosphate isomerase EC 27722; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.990
BF49_5727
Mannose1phosphate guanylyltransferase GDP EC 27722 Mannose6phosphate isomerase EC 27722; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.982
BF49_6587
Probable glycosyl transferase.
  
  
 0.923
gmd-2
GDPmannose 46dehydratase EC 42147; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 
0.900
BF49_5721
UDPNacetylglucosamine 46dehydratase EC 421.
  
  
 0.771
BF49_2433
UDPglucose 4epimerase EC 5132.
  
0.737
BF49_2452
Glycosyltransferase.
  
  
 0.662
BF49_2586
Exopolysaccharide production protein Pss.
  
  
 0.662
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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