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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2446Acyltransferase 3. (350 aa)    
Predicted Functional Partners:
BF49_2449
Acyltransferase.
 
   
 0.777
BF49_2447
Acyltransferase.
 
    
0.722
BF49_0793
Superfamily I DNA and RNA helicases and helicase subunits.
  
    0.585
BF49_0474
InterPro IPR001687IPR006021 COGs COG1525.
   
  
 0.535
BF49_3103
Beta13glucosyltransferase.
 
   
 0.486
BF49_4276
UTPglucose1phosphate uridylyltransferase EC 2779.
 
   
 0.484
BF49_2448
Hypothetical protein.
       0.477
BF49_6456
Putative membrane protein.
  
     0.453
BF49_0540
Polysaccharide deacetylase.
 
   
 0.436
BF49_2442
Acyltransferase.
  
     0.403
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.