STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2464Bacteriophage N4 adsorption protein A. (843 aa)    
Predicted Functional Partners:
BF49_2591
Bacteriophage N4 adsorption protein B.
 
  
 0.864
BF49_2462
Alginate biosynthesis protein AlgX.
 
     0.755
BF49_1677
Bll3016 hypothetical protein.
  
    0.584
BF49_1680
Putative transmembrane antisigma factor.
 
     0.584
BF49_5306
TPR repeat.
 
 0.543
BF49_0864
Hypothetical protein.
  
     0.536
BF49_1571
Blr2472 unknown protein.
  
     0.531
BF49_2463
Hypothetical protein.
       0.516
BF49_0424
Carboxylterminal protease EC 3421102; Belongs to the peptidase S41A family.
  
 
 0.497
BF49_6733
Carboxylterminal protease family protein; Belongs to the peptidase S41A family.
  
 
 0.497
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.