Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_2479Dolicholphosphate mannosyltransferase EC 24183 in lipidlinked oligosaccharide synthesis cluster. (393 aa)    
Predicted Functional Partners:
BF49_0216
Chromosome plasmid partitioning protein ParA.
  
 
 0.846
BF49_5306
TPR repeat.
  
 0.840
BF49_2480
Glycosyltransferase.
 
  
 0.797
BF49_3913
Creatinine amidohydrolase EC 35210.
 
  
 0.707
BF49_2495
Glycosyl transferase group 2 family protein.
 
  
 0.659
BF49_3922
DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.628
BF49_6474
Rossmann fold nucleotidebinding protein Smf possibly involved in DNA uptake.
  
    0.601
BF49_1165
Adenylate cyclase EC 4611.
  
 0.598
BF49_3165
Adenylate cyclase EC 4611.
  
 0.598
BF49_3957
Kinesin light chain.
  
 0.591
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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