Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2481Eight transmembrane protein EpsH. (275 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0 sector subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.983
BF49_2483
Cell binding factor 2 precursor.
 
 
   0.852
BF49_2491
TPR domain protein putative component of TonB system.
 
     0.817
BF49_1166
Conserved domain protein.
    
 0.812
BF49_2132
Hypothetical protein.
    
 0.812
BF49_4392
Hypothetical protein.
    
 0.812
BF49_7074
Phosphatidylglycerophosphatase B EC 31327.
    
 0.812
BF49_2484
EpsI protein.
 
     0.784
BF49_2488
General secretion pathway protein A.
 
  
 0.779
BF49_2489
Capsular polysaccharide biosynthesisexport periplasmic protein WcbA Capsular polysaccharide export system protein KpsC.
 
   
 0.742
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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