STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2481Eight transmembrane protein EpsH. (275 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0 sector subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.990
BF49_2483
Cell binding factor 2 precursor.
 
 
   0.850
BF49_2491
TPR domain protein putative component of TonB system.
 
     0.783
BF49_2484
EpsI protein.
 
     0.776
BF49_2488
General secretion pathway protein A.
 
    0.761
BF49_2489
Capsular polysaccharide biosynthesisexport periplasmic protein WcbA Capsular polysaccharide export system protein KpsC.
 
     0.739
BF49_0782
Endonuclease.
    
 0.737
BF49_2487
FIG01024239 hypothetical protein.
 
     0.597
BF49_2486
Tyrosineprotein kinase Wzc EC 27102.
 
    0.579
BF49_1166
Conserved domain protein.
    
 
 0.576
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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