STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2491TPR domain protein putative component of TonB system. (657 aa)    
Predicted Functional Partners:
BF49_2492
Hypothetical protein.
  
 
 0.848
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.812
BF49_2487
FIG01024239 hypothetical protein.
 
     0.799
BF49_1559
Cytochrome c heme lyase subunit CcmF.
  
 
 0.789
BF49_2488
General secretion pathway protein A.
 
     0.787
BF49_2481
Eight transmembrane protein EpsH.
 
     0.783
BF49_2489
Capsular polysaccharide biosynthesisexport periplasmic protein WcbA Capsular polysaccharide export system protein KpsC.
 
   
 0.756
queA
SadenosylmethioninetRNA ribosyltransferaseisomerase EC 5; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
  
    0.704
BF49_2584
General secretion pathway protein D.
 
    0.697
BF49_5306
TPR repeat.
  
 0.659
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.