Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2504Hypothetical protein. (700 aa)    
Predicted Functional Partners:
BF49_2507
Membrane protein.
 
     0.795
BF49_2495
Glycosyl transferase group 2 family protein.
  
   
 0.763
BF49_5407
Outer membrane receptor proteins mostly Fe transport.
   
 0.738
BF49_2506
Polysaccharide biosynthesis protein.
 
   
 0.734
BF49_0231
Cell division protein FtsK.
   
 
 0.718
BF49_2480
Glycosyltransferase.
  
   
 0.707
BF49_2509
Dolicholphosphate mannosyltransferase EC 24183 in lipidlinked oligosaccharide synthesis cluster.
 
   
 0.695
BF49_0424
Carboxylterminal protease EC 3421102; Belongs to the peptidase S41A family.
  
 0.674
BF49_6733
Carboxylterminal protease family protein; Belongs to the peptidase S41A family.
  
 0.674
BF49_0324
Outer membrane protein OmpAMotB family.
 
 
 0.641
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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