Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2507Membrane protein. (468 aa)    
Predicted Functional Partners:
BF49_2506
Polysaccharide biosynthesis protein.
 
  
 0.961
BF49_2508
Glycosyl transferase group 1.
 
  
 0.943
BF49_2509
Dolicholphosphate mannosyltransferase EC 24183 in lipidlinked oligosaccharide synthesis cluster.
 
  
 0.861
BF49_2495
Glycosyl transferase group 2 family protein.
 
  
 0.822
BF49_2504
Hypothetical protein.
 
     0.795
BF49_2480
Glycosyltransferase.
 
  
 0.792
BF49_6587
Probable glycosyl transferase.
  
  
 0.642
BF49_2487
FIG01024239 hypothetical protein.
 
  
 0.542
BF49_2486
Tyrosineprotein kinase Wzc EC 27102.
 
  
 0.519
BF49_5306
TPR repeat.
  
  
 0.447
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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