STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2516Hypothetical protein. (406 aa)    
Predicted Functional Partners:
BF49_2517
Protein gp47 recombinationrelated Bacteriophage A118.
 
     0.948
BF49_1080
Antitoxin 1.
  
     0.680
BF49_4560
Hypothetical protein.
  
     0.669
BF49_4392
Hypothetical protein.
  
     0.615
BF49_4189
Hypothetical protein.
  
     0.585
BF49_5947
Possible cyclic nucleotidebinding domain.
  
     0.583
BF49_4609
Hypothetical protein.
  
     0.577
BF49_0863
Blr4188 hypothetical protein.
  
     0.563
BF49_4557
Hypothetical ABC transport system periplasmic component.
  
     0.556
vapC
Toxin 1 PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.536
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.