STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2525Hypothetical protein. (128 aa)    
Predicted Functional Partners:
BF49_7226
FIG00440594 hypothetical protein.
  
 0.457
BF49_2504
Hypothetical protein.
  
 
 0.434
BF49_3572
FIG01200701 possible membrane protein.
  
 
 0.434
BF49_4411
FIG00853353 hypothetical protein.
  
 
 0.434
BF49_4812
Chemotaxis protein motC.
  
 
 0.434
BF49_6683
Glycosyl hydrolase BNR repeat.
  
 
 0.434
secY
Preprotein translocase secY subunit TC 3A511; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.424
BF49_1579
Cation transport ATPase.
   
 0.412
BF49_4465
Mg2 transport ATPase Ptype EC 3632.
   
 0.412
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.