STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2580General secretion pathway protein F. (415 aa)    
Predicted Functional Partners:
BF49_2581
General secretion pathway protein E.
 
 
 0.997
BF49_0472
Hypothetical protein.
  
  
 0.884
BF49_2584
General secretion pathway protein D.
 
  
 0.854
BF49_2576
General secretion pathway protein O; Belongs to the peptidase A24 family.
 
  
 0.830
BF49_6829
Singlestranded DNAbinding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.794
BF49_2582
General secretion pathway protein K.
 
   
 0.746
BF49_6474
Rossmann fold nucleotidebinding protein Smf possibly involved in DNA uptake.
 
  
 0.699
BF49_6727
DNA internalizationrelated competence protein ComECRec2.
  
  
 0.688
BF49_0571
Competence protein F homolog phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy.
  
  
 0.650
BF49_0486
LysM domain protein.
    
   0.595
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.