Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2581General secretion pathway protein E. (593 aa)    
Predicted Functional Partners:
BF49_2580
General secretion pathway protein F.
 
 
 0.998
BF49_0472
Hypothetical protein.
  
 
 0.922
BF49_2584
General secretion pathway protein D.
 
  
 0.849
BF49_6829
Singlestranded DNAbinding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.828
BF49_2582
General secretion pathway protein K.
 
  
 0.782
BF49_2576
General secretion pathway protein O; Belongs to the peptidase A24 family.
 
 
 0.777
BF49_6474
Rossmann fold nucleotidebinding protein Smf possibly involved in DNA uptake.
 
  
 0.756
BF49_0486
LysM domain protein.
    
 
 0.664
BF49_2142
Twocomponent hybrid sensor and regulator.
   
 
 0.655
BF49_0571
Competence protein F homolog phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy.
  
  
 0.608
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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