Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_2591Bacteriophage N4 adsorption protein B. (498 aa)    
Predicted Functional Partners:
BF49_2590
UDPNacetylglucosamine 2epimerase EC 51314; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.873
BF49_2464
Bacteriophage N4 adsorption protein A.
 
  
 0.864
BF49_5306
TPR repeat.
  
 0.840
BF49_3913
Creatinine amidohydrolase EC 35210.
  
  
 0.662
BF49_1165
Adenylate cyclase EC 4611.
  
 0.598
BF49_3165
Adenylate cyclase EC 4611.
  
 0.598
BF49_2462
Alginate biosynthesis protein AlgX.
 
 
 0.592
BF49_3957
Kinesin light chain.
  
 0.591
BF49_3958
Bll8142 hypothetical protein.
  
 0.591
BF49_0496
Peptidase C14 caspase catalytic subunit p20.
  
 0.588
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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