Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2592Capsular polysaccharide biosynthesisexport periplasmic protein WcbA Capsular polysaccharide export system protein KpsC. (409 aa)    
Predicted Functional Partners:
BF49_2489
Capsular polysaccharide biosynthesisexport periplasmic protein WcbA Capsular polysaccharide export system protein KpsC.
     
 0.956
BF49_7318
Capsular polysaccharide biosynthesisexport periplasmic protein WcbA Capsular polysaccharide export system protein KpsC.
     
 0.956
BF49_2451
Succinoglycan biosynthesis transport protein.
 
 
 0.928
BF49_3106
Succinoglycan biosynthesis transport protein.
  
 
 0.927
BF49_6589
Lipopolysaccharide biosynthesis.
  
 
 0.916
BF49_6587
Probable glycosyl transferase.
  
  
 0.900
BF49_7053
Oantigen export system permease protein RfbD.
  
 
 0.879
BF49_3465
FIG01005307 hypothetical protein.
 
 
 0.863
BF49_2487
FIG01024239 hypothetical protein.
  
 
 0.788
BF49_2432
Mannose1phosphate guanylyltransferase GDP EC 27722 Mannose6phosphate isomerase EC 27722; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.673
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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