STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2610Protocatechuate 34dioxygenase alpha chain EC 113113. (208 aa)    
Predicted Functional Partners:
BF49_2611
Protocatechuate 34dioxygenase beta chain EC 113113.
 
0.998
BF49_5982
3carboxyciscismuconate cycloisomerase EC 5512.
 
 
 0.991
BF49_2608
Phydroxybenzoate hydroxylase EC 114132.
 
  
 0.985
BF49_4153
Phydroxybenzoate hydroxylase EC 114132.
 
  
 0.985
BF49_1527
3carboxyciscismuconate cycloisomerase EC 5512.
 
 
 0.980
BF49_4053
3carboxyciscismuconate cycloisomerase EC 5512.
 
 
 0.978
BF49_7259
Protocatechuate 34dioxygenase beta chain EC 113113.
 
0.946
BF49_1198
45dihydroxyphthalate decarboxylase EC 41155.
     
  0.900
BF49_5980
Betaketoadipate enollactone hydrolase EC 31124.
 
  
 0.833
BF49_3273
4carboxymuconolactone decarboxylase EC 41144.
 
  
 0.689
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.