STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2612Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family. (311 aa)    
Predicted Functional Partners:
pncB
Nicotinate phosphoribosyltransferase EC 24211; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.617
BF49_2611
Protocatechuate 34dioxygenase beta chain EC 113113.
     
 0.562
BF49_2610
Protocatechuate 34dioxygenase alpha chain EC 113113.
     
 0.554
BF49_2614
Hypothetical protein.
       0.504
BF49_3526
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.485
BF49_0879
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.483
BF49_1448
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.469
BF49_4155
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.465
BF49_5706
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.438
BF49_1458
Miscellaneous not classified regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.431
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.