Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_2619TcuB works with TcuA to oxidize tricarballylate to cisaconitate. (368 aa)    
Predicted Functional Partners:
BF49_2620
TcuA flavoprotein used to oxidize tricarballylate to cisaconitate.
 
 0.982
BF49_3801
Fumarate reductase flavoprotein subunit EC 13991.
 
 0.918
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 0.876
BF49_1548
NADdependent formate dehydrogenase gamma subunit.
   
 0.822
BF49_6642
NADHubiquinone oxidoreductase chain E EC 1653.
   
 0.822
BF49_3286
Electron transfer flavoprotein beta subunit.
   
 
 0.796
BF49_4851
Succinate dehydrogenasefumarate reductase flavoprotein subunit.
 
 0.755
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 
 0.752
napD
Periplasmic nitrate reductase component NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
 
  
 0.748
BF49_1875
Assimilatory nitrate reductase large subunit EC17994; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
 0.747
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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