STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2619TcuB works with TcuA to oxidize tricarballylate to cisaconitate. (368 aa)    
Predicted Functional Partners:
BF49_2620
TcuA flavoprotein used to oxidize tricarballylate to cisaconitate.
 
 0.990
BF49_3801
Fumarate reductase flavoprotein subunit EC 13991.
 
 0.953
BF49_4851
Succinate dehydrogenasefumarate reductase flavoprotein subunit.
 
 0.866
BF49_1965
Fumarate reductase flavoprotein subunit EC 13991.
 
 0.851
napD
Periplasmic nitrate reductase component NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
 
  
 0.851
BF49_1489
Adenylylsulfate reductase alphasubunit EC 18992.
 
 0.847
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 0.845
BF49_1548
NADdependent formate dehydrogenase gamma subunit.
   
 0.813
BF49_6642
NADHubiquinone oxidoreductase chain E EC 1653.
   
 0.813
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 
 0.812
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.