STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2638ABC transporter substratebinding protein. (414 aa)    
Predicted Functional Partners:
BF49_1025
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.861
BF49_1029
Benzoate transport ATPase component.
 
 
  0.859
BF49_1026
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.851
BF49_1028
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
 
  0.825
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.816
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.791
BF49_2026
ABC transporter ATPbinding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.778
BF49_4158
ABCtype branchedchain amino acid transport systems ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.778
BF49_2637
FIG01073729 hypothetical protein.
       0.535
BF49_6017
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.517
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.