STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_26472keto4pentenoate hydratase EC 42180. (310 aa)    
Predicted Functional Partners:
BF49_0224
2keto4pentenoate hydratase EC 42180.
  
  
 
0.928
BF49_5812
2oxohepta3ene17dioic acid hydratase EC 42.
  
  
 
0.927
BF49_2116
34dihydroxyphenylacetate 23dioxygenase EC 1131115.
 
  
 0.862
BF49_5943
Putative 24dihydroxyhept2ene17dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.842
BF49_1719
24dihydroxyhept2ene17dioic acid aldolase EC 412n4; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.832
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
 
  
 0.795
BF49_1725
34dihydroxyphenylacetate 23dioxygenase HpaD EC 113112.
 
   
 0.689
BF49_6349
Biphenyl23diol 12dioxygenase EC 1131139.
 
   
 0.613
BF49_1726
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
 
 
 0.594
BF49_1258
Rcitramalate synthase EC 231182; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.536
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.