Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2662Adenylate cyclase EC 4611. (273 aa)    
Predicted Functional Partners:
BF49_2663
Adenylate cyclase EC 4611 Guanylate cyclase EC 4612.
 
     0.808
BF49_3165
Adenylate cyclase EC 4611.
  
 
 
 0.734
BF49_3754
Adenylate cyclase EC 4611.
  
     0.729
BF49_2665
Adenylate cyclase EC 4611.
 
     0.698
BF49_5907
FIG01008584 hypothetical protein.
    0.653
BF49_0489
Adenylate cyclase EC 4611.
 
  
 0.651
BF49_0270
Adenylate cyclase EC 4611 Guanylate cyclase EC 4612.
  
     0.649
BF49_6008
Adenylate cyclase EC 4611.
 
   
 0.631
BF49_6532
Adenylate cyclase EC 4611 Guanylate cyclase EC 4612.
  
     0.630
BF49_2607
Adenylate cyclase EC 4611.
 
   
 0.626
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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