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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2664Conserved hypothetical protein perhaps related to histidine degradation. (194 aa)    
Predicted Functional Partners:
BF49_5332
Histidine utilization repressor.
 
  
 0.883
BF49_5008
FOG WD40like repeat.
  
     0.584
BF49_5009
Malic enzyme.
  
     0.582
hutU
Urocanate hydratase EC 42149; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.565
BF49_2665
Adenylate cyclase EC 4611.
       0.523
hutH
Histidine ammonialyase EC 4313.
 
  
 0.522
hutI
Imidazolonepropionase EC 3527.
 
   
 0.504
BF49_5333
Formiminoglutamic iminohydrolase EC 35313.
 
    0.496
BF49_2663
Adenylate cyclase EC 4611 Guanylate cyclase EC 4612.
       0.490
BF49_3159
Nformylglutamate deformylase EC 35168.
 
    0.450
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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