STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2669INTEGRAL MEMBRANE PROTEIN Rhomboid family. (169 aa)    
Predicted Functional Partners:
BF49_2667
Uncharacterized protein conserved in bacteria NMA0228like; Belongs to the UPF0276 family.
 
  
 0.982
BF49_2668
Glutamate synthase NADPH large chain EC 14113.
 
  
 0.979
BF49_2666
Putative signal peptide protein.
 
  
 0.948
BF49_1653
FIG00442790 hypothetical protein.
 
   
 0.755
BF49_2158
Probable RuBisCoexpression protein CbbX.
     
 0.449
BF49_2080
FIG00443075 hypothetical protein.
 
    0.448
BF49_0782
Endonuclease.
     
 0.443
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.