STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2670Hypothetical oxidoreductase. (282 aa)    
Predicted Functional Partners:
BF49_2671
Hypothetical protein.
 
     0.824
BF49_2672
Transcriptional regulator TetR family.
       0.796
BF49_1943
3oxoacylacylcarrierprotein reductase.
  
     0.771
BF49_5178
InterPro IPR002198IPR002347 COGs COG1028; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.754
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.729
BF49_6971
Hypothetical protein.
  
 0.701
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.667
BF49_6569
Shortchain dehydrogenasereductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.643
BF49_0296
Shortchain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.584
BF49_4986
Ribitol 2dehydrogenase EC 11156.
 
    0.577
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.