STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2674Conserved hypothetical protein. (178 aa)    
Predicted Functional Partners:
BF49_2830
Biotin carboxylase EC 63414.
 
 
 0.911
hmgA
Homogentisate 12dioxygenase EC 113115; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
 0.908
BF49_1119
PropionylCoA carboxylase beta chain EC 6413.
  
 
 0.754
BF49_3680
MethylcrotonylCoA carboxylase carboxyl transferase subunit EC 6414.
  
 
 0.754
BF49_6277
PropionylCoA carboxylase beta chain EC 6413.
  
 
 0.754
BF49_7096
MethylcrotonylCoA carboxylase carboxyl transferase subunit EC 6414.
  
 
 0.754
BF49_7200
GeranylCoA carboxylase carboxyl transferase subunit EC 6415.
  
 
 0.754
BF49_1634
MethylmalonylCoA mutase EC 54992.
    
 0.727
BF49_1637
MethylmalonylCoA mutase EC 54992.
    
 0.727
BF49_2671
Hypothetical protein.
 
     0.687
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.