Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_2679Polysaccharide biosynthesis protein. (478 aa)    
Predicted Functional Partners:
BF49_6587
Probable glycosyl transferase.
  
  
 0.832
BF49_2511
dTDP4dehydrorhamnose 35epimerase EC 51313; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.828
BF49_2513
dTDPglucose 46dehydratase EC 42146; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.801
BF49_3101
EXOPOLYSACCHARIDE PRODUCTION PROTEIN EXOQ.
 
  
 0.755
BF49_0115
Exopolysaccharide production protein ExoQ.
 
  
 0.734
BF49_0540
Polysaccharide deacetylase.
 
   
 0.726
BF49_5720
FIG00442610 hypothetical protein.
 
  
 0.723
BF49_3971
UDPglucose dehydrogenase EC 11122.
  
  
 0.694
BF49_3105
Putative Omethyl transferase.
 
   
 0.677
BF49_2512
Glucose1phosphate thymidylyltransferase EC 27724; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.671
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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