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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2679Polysaccharide biosynthesis protein. (478 aa)    
Predicted Functional Partners:
BF49_6587
Probable glycosyl transferase.
  
  
 0.834
BF49_2511
dTDP4dehydrorhamnose 35epimerase EC 51313; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.823
BF49_2513
dTDPglucose 46dehydratase EC 42146; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.805
BF49_3101
EXOPOLYSACCHARIDE PRODUCTION PROTEIN EXOQ.
 
  
 0.740
BF49_3971
UDPglucose dehydrogenase EC 11122.
  
  
 0.735
BF49_2512
Glucose1phosphate thymidylyltransferase EC 27724; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.728
BF49_5300
Glucose1phosphate thymidylyltransferase EC 27724.
  
  
 0.728
BF49_0115
Exopolysaccharide production protein ExoQ.
 
  
 0.717
BF49_2429
Hypothetical protein.
  
  
 0.707
BF49_0540
Polysaccharide deacetylase.
 
   
 0.694
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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