STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2681FIG00450136 hypothetical protein. (316 aa)    
Predicted Functional Partners:
BF49_3101
EXOPOLYSACCHARIDE PRODUCTION PROTEIN EXOQ.
 
     0.777
BF49_3104
UDPhexose transferase.
 
     0.752
BF49_0704
InterPro IPR000498.
  
     0.643
BF49_3919
Hypothetical protein.
  
     0.643
BF49_0930
FIG00440297 hypothetical protein.
  
     0.634
BF49_0472
Hypothetical protein.
  
     0.630
BF49_4134
Blr7855 hypothetical protein.
  
     0.595
BF49_3099
Hypothetical protein.
 
     0.588
BF49_6353
Bll6187 protein.
  
     0.584
BF49_3105
Putative Omethyl transferase.
  
     0.578
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.