Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dadADamino acid dehydrogenase small subunit EC 14991; Oxidative deamination of D-amino acids. (421 aa)    
Predicted Functional Partners:
BF49_4845
Damino acid dehydrogenase small subunit EC 14991.
  
  
 
0.923
BF49_0507
4hydroxyphenylpyruvate dioxygenase EC 1131127.
   
 
 0.912
BF49_1720
Hypothetical oxidoreductase YbiC homolog; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.909
BF49_1774
Malate dehydrogenase EC 11137; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.909
BF49_2942
Aspartate aminotransferase EC 2611.
    
 0.905
BF49_3121
Dalanine aminotransferase EC 26121.
     
 0.904
hisC
Biosynthetic Aromatic amino acid aminotransferase beta EC 26157 Histidinolphosphate aminotransferase EC 2619; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.901
hisC-2
Histidinolphosphate aminotransferase EC 2619; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.901
BF49_4342
Opine oxidase subunit A.
  
 0.769
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.743
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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