STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2707Omegaamino acidpyruvate aminotransferase EC 26118; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (442 aa)    
Predicted Functional Partners:
BF49_1098
Methylmalonatesemialdehyde dehydrogenase EC 12127.
 
  
 0.957
BF49_1095
3hydroxyisobutyrate dehydrogenase EC 11131; Belongs to the HIBADH-related family.
     
 0.937
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.928
BF49_1867
Aldehyde dehydrogenase EC 1213.
    
 0.928
BF49_3132
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.928
BF49_0739
InterPro IPR002204 COGs COG2084.
     
 0.922
BF49_1304
2hydroxy3oxopropionate reductase EC 11160.
     
 0.922
BF49_5539
3hydroxyisobutyrate dehydrogenase EC 11131.
     
 0.922
panC
Pantoatebetaalanine ligase EC 6321; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.922
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
   
 
 0.918
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.