Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2715Probable oxalateformate antiporter. (421 aa)    
Predicted Functional Partners:
BF49_7012
Cobaltcontaining nitrile hydratase subunit beta EC 42184; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
  
     0.583
BF49_7170
FIG01006802 hypothetical protein.
  
     0.583
BF49_7013
Putative metal chaperone involved in Fenitrile hydratase activation GTPase of COG0523 family.
  
     0.551
BF49_2716
FIG00443325 hypothetical protein.
       0.530
BF49_7011
Cobaltcontaining nitrile hydratase subunit alpha EC 42184.
  
     0.520
BF49_0730
Major facilitator superfamily.
  
     0.505
BF49_2278
Histone acetyltransferase HPA2 and related acetyltransferases.
 
   
 0.435
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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