Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2746FIG00444763 hypothetical protein. (161 aa)    
Predicted Functional Partners:
BF49_2747
FIG00450386 membrane protein.
       0.617
BF49_3269
FIG00440552 hypothetical protein.
  
     0.539
BF49_1280
Similar to flavohemoprotein.
  
 
 0.532
BF49_2666
Putative signal peptide protein.
 
    0.525
BF49_2748
Chromosome segregation ATPases.
 
     0.525
BF49_1613
FIG00445928 hypothetical protein.
  
     0.522
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
  
 
 0.515
BF49_5803
FIG00443056 hypothetical protein.
  
     0.493
BF49_4503
Flagellar export protein.
  
     0.479
BF49_0042
FIG00886901 hypothetical protein.
  
     0.476
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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