Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2771Thymidylate kinase EC 2749. (381 aa)    
Predicted Functional Partners:
BF49_2770
Bll7240 hypothetical protein.
 
     0.952
BF49_5180
FIG00439865 hypothetical protein.
  
     0.634
BF49_2692
FIG00440014 hypothetical protein.
  
     0.623
BF49_1384
Blr3364 hypothetical protein.
  
     0.516
BF49_5961
FIG00440141 hypothetical protein.
  
     0.512
BF49_0959
Alkaline phosphatase EC 3131.
  
     0.509
BF49_4392
Hypothetical protein.
  
     0.505
BF49_1989
Hypothetical protein.
  
     0.483
BF49_3570
Hypothetical protein.
  
     0.472
BF49_0304
Bll0546 hypothetical protein.
  
     0.471
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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