STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2777COGs COG3777. (282 aa)    
Predicted Functional Partners:
BF49_2901
MalylCoA lyase EC 41324; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.976
BF49_2775
ButyrylCoA dehydrogenase EC 13992.
 
  
 0.905
BF49_2776
Lcarnitine dehydratasebile acidinducible protein F EC 28316; Belongs to the CoA-transferase III family.
 
 
  0.864
BF49_0012
Immuneresponsive protein 1.
 
  
 0.846
BF49_7337
Immuneresponsive protein 1.
 
  
 0.846
BF49_7308
Biphenyl23diol 12dioxygenase IIIrelated protein.
  
  
 0.817
BF49_0355
MalylCoA lyase EC 41324; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.776
BF49_4864
HydroxymethylglutarylCoA lyase EC 4134; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.776
BF49_6971
Hypothetical protein.
     
  0.525
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
     
  0.501
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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