Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2822FIG00442870 hypothetical protein. (302 aa)    
Predicted Functional Partners:
BF49_2823
Blr7285 hypothetical protein.
       0.585
BF49_2821
Hypothetical protein.
       0.531
BF49_6105
Nitroreductase family protein.
  
    0.522
BF49_1848
FIG00442018 hypothetical protein.
  
    0.519
BF49_6320
FIG00439495 hypothetical protein.
 
    0.502
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.498
BF49_6546
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.496
BF49_0264
Hypothetical protein.
  
     0.487
BF49_5848
FIG00439847 hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
     0.474
BF49_7203
Glutathione Stransferase EC 25118.
  
 
   0.473
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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