Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
BF49_28262dehydro3deoxygalactonokinase EC 27158. (304 aa)    
Predicted Functional Partners:
BF49_2825
2dehydro3deoxyphosphogalactonate aldolase EC 41221.
 
 
 0.999
BF49_6356
Gluconate dehydratase EC 42139; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.971
BF49_1480
Uncharacterized oxidoreductase ydgJ EC 1.
 
   
 0.724
BF49_5510
2dehydro3deoxyphosphogalactonate aldolase EC 41221 6phospho2dehydro3deoxygalactonate aldolase 2 oxo3deoxygalactonate 6phosphate aldolase Galactonate dehydratase EC 4216; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.699
BF49_1478
14lactonase EC 31125.
 
     0.690
BF49_4922
Muconolactone isomerase EC 5334putative; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.673
BF49_1140
Xylonate dehydratase EC 42182; Belongs to the IlvD/Edd family.
 
  
 0.647
BF49_1895
Mandelate racemasemuconate lactonizing enzyme family protein.
 
 
 0.647
BF49_4946
Gluconate dehydratase EC 42139.
 
 
 0.630
BF49_1718
Altronate dehydratase EC 4217.
  
  
 0.615
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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