Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2888Major facilitator superfamily MFS 1. (389 aa)    
Predicted Functional Partners:
BF49_2887
Transcriptional regulator ArsR family.
       0.568
carB
Carbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family.
     
 0.549
BF49_5823
Putative multidrug resistance protein.
  
   
 0.499
BF49_5770
Putative transmembrane efflux protein.
  
   
 0.490
BF49_1082
MFS permease.
  
   
 0.400
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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