Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
carBCarbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family. (1154 aa)    
Predicted Functional Partners:
carA
Carbamoylphosphate synthase small chain EC 6355; Belongs to the CarA family.
 0.999
pyrB
Aspartate carbamoyltransferase EC 2132; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.999
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
  
 
 0.997
purF
Amidophosphoribosyltransferase EC 24214; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 
 0.994
BF49_2231
Dihydroorotase EC 3523.
 0.988
BF49_1412
Dhydantoinase EC 3522.
 
 0.986
argG
Argininosuccinate synthase EC 6345; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
 
 
 0.984
BF49_6608
Glutamine synthetase type I EC 6312.
 
 0.982
BF49_0889
Glutamine synthetase type II eukaryotic EC 6312.
  
 0.979
pyrD
Dihydroorotate dehydrogenase EC 1331; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
 0.976
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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