| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BF49_5893 | greA | BF49_5893 | BF49_2891 | DNAdirected RNA polymerase alpha subunit EC 2776. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.824 |
| BF49_5893 | pnp | BF49_5893 | BF49_0059 | DNAdirected RNA polymerase alpha subunit EC 2776. | Polyribonucleotide nucleotidyltransferase EC 2778; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.798 |
| BF49_5893 | rpoA | BF49_5893 | BF49_6255 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase alpha subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.920 |
| BF49_5893 | rpoB | BF49_5893 | BF49_6219 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
| BF49_5893 | rpoC | BF49_5893 | BF49_6221 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
| BF49_5893 | rpoH | BF49_5893 | BF49_2844 | DNAdirected RNA polymerase alpha subunit EC 2776. | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.897 |
| BF49_5893 | rpoZ | BF49_5893 | BF49_6509 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase omega subunit EC 2776; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.983 |
| BF49_5901 | greA | BF49_5901 | BF49_2891 | DNAdirected RNA polymerase alpha subunit EC 2776. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.824 |
| BF49_5901 | pnp | BF49_5901 | BF49_0059 | DNAdirected RNA polymerase alpha subunit EC 2776. | Polyribonucleotide nucleotidyltransferase EC 2778; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.798 |
| BF49_5901 | rpoB | BF49_5901 | BF49_6219 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
| BF49_5901 | rpoC | BF49_5901 | BF49_6221 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
| BF49_5901 | rpoH | BF49_5901 | BF49_2844 | DNAdirected RNA polymerase alpha subunit EC 2776. | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.897 |
| BF49_5901 | rpoZ | BF49_5901 | BF49_6509 | DNAdirected RNA polymerase alpha subunit EC 2776. | DNAdirected RNA polymerase omega subunit EC 2776; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.983 |
| carB | greA | BF49_2890 | BF49_2891 | Carbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.750 |
| carB | rpoB | BF49_2890 | BF49_6219 | Carbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family. | DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.441 |
| greA | BF49_5893 | BF49_2891 | BF49_5893 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNAdirected RNA polymerase alpha subunit EC 2776. | 0.824 |
| greA | BF49_5901 | BF49_2891 | BF49_5901 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNAdirected RNA polymerase alpha subunit EC 2776. | 0.824 |
| greA | carB | BF49_2891 | BF49_2890 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Carbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family. | 0.750 |
| greA | pnp | BF49_2891 | BF49_0059 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Polyribonucleotide nucleotidyltransferase EC 2778; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.793 |
| greA | rpoA | BF49_2891 | BF49_6255 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNAdirected RNA polymerase alpha subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.916 |
