STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2902Probable mdcF malonate transporter. (314 aa)    
Predicted Functional Partners:
BF49_2900
Lcarnitine dehydratasebile acidinducible protein F EC 28316; Belongs to the CoA-transferase III family.
  
    0.815
BF49_2901
MalylCoA lyase EC 41324; Belongs to the HpcH/HpaI aldolase family.
       0.779
BF49_5196
NADdependent malic enzyme EC 11138.
 
  
 0.701
BF49_0917
NADdependent malic enzyme EC 11138.
  
  
 0.681
BF49_6484
FIG00439453 hypothetical protein.
  
   
 0.602
BF49_7008
Citrate Succinate antiporter TC 2A4732.
  
   0.430
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.