Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2933Llactate dehydrogenase EC 1123. (378 aa)    
Predicted Functional Partners:
BF49_4394
Pyruvate kinase EC 27140; Belongs to the pyruvate kinase family.
  
 
 0.959
BF49_1394
DLactate dehydrogenase cytochrome cdependent EC 1124.
 
 0.945
BF49_5109
DLactate dehydrogenase cytochrome cdependent EC 1124.
  
 0.938
BF49_2128
Pyruvate oxidase EC 1233; Belongs to the TPP enzyme family.
  
 
 0.928
BF49_2824
Pyruvate oxidase ubiquinone cytochrome EC 1222; Belongs to the TPP enzyme family.
  
 
 0.928
BF49_0917
NADdependent malic enzyme EC 11138.
    
 0.926
BF49_0473
Serineglyoxylate aminotransferase EC 26145.
  
 0.924
BF49_5632
Serineglyoxylate aminotransferase EC 26145.
  
 0.924
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
    
 0.921
BF49_6364
Bll5266 protein; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily.
   
 
 0.921
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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