Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2976FIG018229 hypothetical protein. (127 aa)    
Predicted Functional Partners:
lgt
Prolipoprotein diacylglyceryl transferase EC 2499; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.634
BF49_2979
COG1565 Uncharacterized conserved protein.
       0.633
BF49_2980
COG1496 Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.633
BF49_0025
Universal stress protein UspA and related nucleotidebinding proteins.
  
     0.632
BF49_7350
Universal stress protein UspA and related nucleotidebinding proteins.
  
     0.632
BF49_5156
FIG00443822 hypothetical protein.
  
     0.630
BF49_4397
FIG00451076 hypothetical protein; Belongs to the UPF0335 family.
  
     0.597
BF49_2981
FIG00441988 hypothetical protein.
 
     0.578
BF49_2977
Dienelactone hydrolase family.
       0.573
BF49_3990
Putative transmembrane protein.
  
     0.566
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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