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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2977Dienelactone hydrolase family. (243 aa)    
Predicted Functional Partners:
BF49_1390
Alcohol dehydrogenase EC 1111.
  
 
 0.945
BF49_7192
Alcohol dehydrogenase EC 1111.
  
 
 0.944
BF49_1393
Catechol 12dioxygenase EC 113111.
   
 
 0.925
BF49_1887
Catechol 12dioxygenase EC 113111.
   
 
 0.925
lgt
Prolipoprotein diacylglyceryl transferase EC 2499; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.768
BF49_2979
COG1565 Uncharacterized conserved protein.
       0.709
BF49_2980
COG1496 Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.709
BF49_5564
FIG00440890 hypothetical protein.
  
  
 0.601
BF49_2976
FIG018229 hypothetical protein.
       0.571
gcvP
Glycine dehydrogenase decarboxylating glycine cleavage system P protein EC 1442; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.458
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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