STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2987FIG00449860 hypothetical protein. (166 aa)    
Predicted Functional Partners:
BF49_0596
FIG003437 hypothetical with DnaJlike domain.
  
     0.729
secE
Preprotein translocase subunit SecE TC 3A511; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.661
BF49_0606
Aerobic cobaltochelatase CobT subunit EC 6612.
  
     0.643
BF49_4397
FIG00451076 hypothetical protein; Belongs to the UPF0335 family.
  
     0.609
BF49_0068
FIG01004913 hypothetical protein.
  
     0.603
BF49_0086
FIG041266 ATPdependent nuclease subunit B.
  
     0.601
BF49_3300
HNH endonuclease family protein.
 
    0.586
BF49_5156
FIG00443822 hypothetical protein.
  
     0.586
BF49_0961
DNA polymerase III chi subunit EC 2777.
  
     0.577
proC
Pyrroline5carboxylate reductase EC 1512; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
 
     0.575
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.