Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2992Conserved hypothetical proteinputative secreted protein. (130 aa)    
Predicted Functional Partners:
BF49_6112
FIG00446431 hypothetical protein.
  
     0.701
hisS
HistidyltRNA synthetase EC 61121.
       0.648
BF49_3145
Hypothetical protein contains weak similarity to NADH dehydrogenase I.
  
     0.596
BF49_0241
FIG00440108 hypothetical protein.
  
     0.550
BF49_0802
Hypothetical protein.
  
    0.533
BF49_0472
Hypothetical protein.
  
     0.526
BF49_2946
FIG00853207 hypothetical protein.
  
     0.523
BF49_3690
Conserved hypothetical protein putative signal peptide.
  
     0.521
BF49_7086
Hypothetical protein.
  
     0.521
BF49_3919
Hypothetical protein.
  
     0.506
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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