STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3003Ribonuclease; Belongs to the RNase T2 family. (230 aa)    
Predicted Functional Partners:
rlmJ
Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.655
BF49_3002
FIG00441778 hypothetical protein.
 
     0.620
BF49_2106
Extensinlike protein.
  
     0.543
BF49_6443
FIG00442641 hypothetical protein.
  
     0.538
BF49_3931
Murein endopeptidase.
  
   
 0.461
BF49_5023
Bll6625 hypothetical protein.
  
     0.458
BF49_6437
Glycerophosphoryl diester phosphodiesterase EC 31446.
  
     0.435
BF49_2105
ErfKYbiSYcfSYnhG.
  
     0.431
BF49_4036
Outermembrane immunogenic protein.
  
     0.424
BF49_3006
Surface antigen.
  
     0.422
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.