STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3016Diguanylate phosphodiesterase. (493 aa)    
Predicted Functional Partners:
BF49_3110
Diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensors.
 
  
 0.817
BF49_0712
Bll4347 protein.
 
  
 0.803
BF49_4423
Diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensors.
 
 
 0.798
BF49_3017
HAD superfamily protein involved in Nacetylglucosamine catabolism.
 
     0.796
BF49_3932
Putative diguanylate cyclase GGDEFphosphodiesterase EAL with PAS domains.
 
 
 0.791
BF49_7234
Diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensors.
 
 
 0.789
BF49_6734
FIG00439846 hypothetical protein.
 
 
 0.788
BF49_6103
GGDEF domain protein.
 
 
 0.784
BF49_4161
Diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensors.
 
 
 0.776
BF49_6371
Flagellar motor switch protein FliN.
  
    0.767
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.